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Projects

This is a short list of projects I’ve been working on over the past few years.

PhD #

Master’s #

  • Thesis: Genomic Profiling of a Comprehensive Nation-wide Collection of Childhood Solid Tumors
    • nf-core/rnafusion: RNA-seq analysis pipeline for detection gene-fusions
    • fusion-report: Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline
  • DM855-classification: Different supervised techniques (doesn’t work correctly on a chosen dataset)
  • DM843-project: Testing different clustering methods on protein similarity matrix generated by BLAST
  • DM847: Random forest tree classification of different candies from breath samples

Bachelor’s #

Contributions #